bayesImageS 0.5-0

New features

improvements to Bayesian indirect likelihood (BIL) algorithm (mh$alg="aux"):
- MH hyperparameter Ecrit for 2nd order phase transition when k > 4
- MH hyperparameter factor to inflate the variance of the surrogate model
- separate MH hyperparameters Vmax1,Vmax2 for $\beta < \beta_{crit}$ and $\beta > \beta_{crit}$, respectively
option mh$sort to impose an ordering constraint on the component means

removed OpenMP options from Makevars to fix problems with RcppArmadillo. Users should edit ~/.R/Makevars to enabel multithreading.
no longer wait for mh$auxiliary iterations before beginning to update $\beta$ using the exchange algorithm or ABC. For $\beta > \beta_{crit}$, this increased the propensity of the Gibbs sampler to become stuck in a suboptimal local mode, far from the true parameter value.
added jss.bst and jss.cls to .Rbuildignore

Functions getNeighbors(), getEdges(), getBlocks() contributed by Dai Feng. These are currently exact copies of the equivalent functions in the R package PottsUtils. The reason for duplicating this code is to avoid picking up dependencies on miscF, R2jags, BRugs, etc.
- https://cran.r-project.org/package=PottsUtils
Added new option to swNoData and mcmcPottsNoData to initialise the labels using either random or deterministic values. This can be useful when comparing the convergence of the Swendsen-Wang and Gibbs sampling algorithms to known distributions (e.g. when $\beta$=0 or $\infty$)
Additional documentation in README.md with an example of usage

Fixed compile errors on SPARC Solaris
- https://www.r-project.org/nosvn/R.check/r-patched-solaris-x86/bayesImageS-00check.html
Fixed compile warnings from icpc (Intel Parallel Studio XE) on Linux
Added bayesImageS_init.cpp to call R_registerRoutines and R_useDynamicSymbols